CDS

Accession Number TCMCG016C13073
gbkey CDS
Protein Id OMO79041.1
Location join(73411..74020,74441..74500,74582..75286,75421..75557,76182..76778)
Organism Corchorus capsularis
locus_tag CCACVL1_13940

Protein

Length 702aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010499.1
Definition hypothetical protein CCACVL1_13940 [Corchorus capsularis]
Locus_tag CCACVL1_13940

EGGNOG-MAPPER Annotation

COG_category S
Description TATA box-binding protein-associated factor RNA polymerase I subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000120        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0001013        [VIEW IN EMBL-EBI]
GO:0001046        [VIEW IN EMBL-EBI]
GO:0001047        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001163        [VIEW IN EMBL-EBI]
GO:0001164        [VIEW IN EMBL-EBI]
GO:0001188        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005668        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006360        [VIEW IN EMBL-EBI]
GO:0006361        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070860        [VIEW IN EMBL-EBI]
GO:0070897        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCAGGATTGCTCCCAGTGGGCATGCCACATATGTGGGAACCTTGGAATGTCAGATGGATTGGATGGCTTTTTCTACTGCTTGAGGTGTGGGTCTCAGGCTGATGATGTCATTGATACCGGTGTTGCTGATGAAGATTTCGTTGATAAGGGTACCCATGGTGGTGCCATTTACTTGTCCAGCCATACACGTCATTCTCGTCAACCTATTACCCCAGCCCAACCAGTCTCACAATATGATCCCAAGTCTCAGCAGTTTTGGTCTCAATTGAGCCAAGAACACAGAGATCATGATGGTAATCAGGATGCAGTGGGAGAGGATGCTGGTTTCGATAGTGTGGAGCCAACAGGAACAAGTGATTTTGGGTCATACTCTGTGGGTGTGTATAGCTATGAAGATTATTACACAGAACTTAGGAACAGGTATGTGATGGGGTTGCAGATGATGATACAGGCCCAATGTGAGGCTCTAGTAGAGAAGTTTAATGTGAAACCCTTGATTTGTGGGATAGTTGGACCCATTTGGTTGAGGTTTGTGGCTAGCACTAGGATTTTTGATGATAGTTGGGCTGACGAGGCTATTCATGAGTCTGAGATTCAAAAAACAGGAGAAGCTGAGGATTTTATTCCACATTCTAAGCACAAGGCAGAACCTCATAACATGCATGGATGTTATGTTGCAAGGGAAGGAGTTTTACCAACAGACATGGTTAAGTGGTCAGTTGAAGGGGAGCTTACGTATTTTGATGCTTTTATTGAAATTGAGAAGCGCATTGGAAGGTCTCTGCCTCCGTTTCCTTTAAGTTTAAGAAGTATGTTCAGGCCTTCACACGCTGTCCCAGCTAAAAAGTTGGAAGCACTGGCAGCTAAAATTGCTCAGTGCATAGGCTTGAATTTACCACCAGTAAATTTCTATGCAATTGCTTCCAGATATCTAAAGGAGTTATCTCTTCCACTGGAGAAGATTCTACCACATGCATGCCGCATACATGAGTGGGTGTTGCCTCCAGAATTACGGTTATCTGCAAATGATAATGGACTTCCTGCGCATGTCTACGTGATGTCGATACTGGTTGTAGCAGTACGGATTTTGTATAACATAAATGGATTTGGGGTGTGGGAAAAGAGTTTGTCTTGTCACAATCTCCCTAGTAAATCTAATGAAGCTGTGAGCAAGGATGCCACTAGTGGTTGTGAAGATAGGGACAATGCATATGATAGTTCTGGTTCTTCTCGTAGTGTGGATGATATGGATAAAAGTTCAACTAGAAACTCGTTAGATGATAATGAGTCCAAGTTTGATGCTGCAGAGCTCTTGTGCAACCTTGAAGCTAGATACAATGAGATTGATTATGCAGACACTGATGTTAAGAATCTTTCTAAAAGCATGCCAACATATCTACAATTCTGTCAGGATGTGGTCTTTGCTGGATCAGAGCCGTCCATGGACTTTTATCACGAGGAGAAAAGTTTAATTGACAAGTTCTGGGAATTTTATCAGAAAGAAAAGGGTTCTGAACCAGAAGCAAACGCCGGAGAGGAGCAAAATAGGAGTGCCAATGGCGCTGCCTATAAAGTGAATAAAAAGGTCAGGGATGATGAATGTCCTAGTAATCCCTCCATTAATCGAAGGTCCGGCGATGAGGATTACATGGATGTTGACCACTCTTCTCCGACTTCAGAGGAACAAGGAAATTCAGCAGAACCGGAGGAGAAAATTCCCGTAGAGACTTCGAAAGATAGGGCAATTAGACTGATGAAAAGAAACATGGAGGAGAACCTGTTCTTTTATATTCCACCAAGGGTCAAGCTGAAGAGACTGGATTACCTTCACTATATGAGGAAGAGAGATGAAGGTACCCTTGCTTACATCGCTCATGCTGATTACTACATCCTGCTTCGTTCTTGTGCTAGGGTTGCTGAAGTTGACGTGCGAATTATGCATATTGGAGTACTAAGTATGGAGAAAAGATTAGCTTGGTTGGAAAAAAGAACTGATCATTGCTTGCATTTGAATCCTCCTAATGTTACATGTAAATTTTGTACTGATGACTCTGAGCAAGCTCAAGATGATCCTTCAATTGGACTTTCTAACCTCAATTTATGA
Protein:  
MEQDCSQWACHICGNLGMSDGLDGFFYCLRCGSQADDVIDTGVADEDFVDKGTHGGAIYLSSHTRHSRQPITPAQPVSQYDPKSQQFWSQLSQEHRDHDGNQDAVGEDAGFDSVEPTGTSDFGSYSVGVYSYEDYYTELRNRYVMGLQMMIQAQCEALVEKFNVKPLICGIVGPIWLRFVASTRIFDDSWADEAIHESEIQKTGEAEDFIPHSKHKAEPHNMHGCYVAREGVLPTDMVKWSVEGELTYFDAFIEIEKRIGRSLPPFPLSLRSMFRPSHAVPAKKLEALAAKIAQCIGLNLPPVNFYAIASRYLKELSLPLEKILPHACRIHEWVLPPELRLSANDNGLPAHVYVMSILVVAVRILYNINGFGVWEKSLSCHNLPSKSNEAVSKDATSGCEDRDNAYDSSGSSRSVDDMDKSSTRNSLDDNESKFDAAELLCNLEARYNEIDYADTDVKNLSKSMPTYLQFCQDVVFAGSEPSMDFYHEEKSLIDKFWEFYQKEKGSEPEANAGEEQNRSANGAAYKVNKKVRDDECPSNPSINRRSGDEDYMDVDHSSPTSEEQGNSAEPEEKIPVETSKDRAIRLMKRNMEENLFFYIPPRVKLKRLDYLHYMRKRDEGTLAYIAHADYYILLRSCARVAEVDVRIMHIGVLSMEKRLAWLEKRTDHCLHLNPPNVTCKFCTDDSEQAQDDPSIGLSNLNL